UMGCC FCSS
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Please see left-sidebar for definitions

3L

QC Status: Pass

4L

QC Status: Pass

5L

QC Status: Pass

CS

QC Status: Pass

  • 3L
  • 4L
  • 5L
  • CS
  • History
Detector
Gain
%RCV
Value Status Value Status
FSC 531 Pass 1.79 Pass
SSC 287 Pass 4.20 Pass
SSC-B 144 Pass 4.10 Pass
V1 330 Pass 1.11 Pass
V2 348 Pass 1.24 Pass
V3 430 Pass 1.45 Pass
V4 261 Pass 1.62 Pass
V5 341 Pass 1.69 Pass
V6 296 Pass 1.77 Pass
V7 394 Pass 2.07 Pass
V8 664 Pass 2.55 Pass
V9 537 Pass 2.62 Pass
V10 417 Pass 2.60 Pass
V11 345 Pass 2.45 Pass
V12 295 Pass 2.22 Pass
V13 305 Pass 2.03 Pass
V14 465 Pass 1.89 Pass
V15 537 Pass 1.62 Pass
V16 439 Pass 1.75 Pass
B1 690 Pass 2.14 Pass
B2 400 Pass 1.99 Pass
B3 420 Pass 2.04 Pass
B4 404 Pass 2.07 Pass
B5 332 Pass 2.11 Pass
B6 243 Pass 2.22 Pass
B7 446 Pass 2.07 Pass
B8 382 Pass 2.12 Pass
B9 502 Pass 2.12 Pass
B10 379 Pass 1.99 Pass
B11 297 Pass 2.07 Pass
B12 420 Pass 1.91 Pass
B13 487 Pass 2.04 Pass
B14 533 Pass 1.96 Pass
R1 254 Pass 1.61 Pass
R2 312 Pass 1.46 Pass
R3 392 Pass 1.48 Pass
R4 373 Pass 1.43 Pass
R5 378 Pass 1.64 Pass
R6 394 Pass 1.94 Pass
R7 930 Pass 2.67 Pass
R8 428 Pass 2.19 Pass
Detector
Gain
%RCV
Value Status Value Status
FSC 456 Pass 1.21 Pass
SSC 124 Pass 2.82 Pass
SSC-B 132 Pass 4.48 Pass
UV1 212 Pass 3.75 Pass
UV2 132 Pass 2.37 Pass
UV3 110 Pass 1.94 Pass
UV4 104 Pass 1.87 Pass
UV5 137 Pass 1.77 Pass
UV6 187 Pass 1.68 Pass
UV7 272 Pass 1.62 Pass
UV8 239 Pass 1.59 Pass
UV9 304 Pass 1.71 Pass
UV10 190 Pass 1.65 Pass
UV11 253 Pass 1.65 Pass
UV12 221 Pass 1.75 Pass
UV13 308 Pass 1.77 Pass
UV14 612 Pass 1.84 Pass
UV15 474 Pass 1.92 Pass
UV16 678 Pass 2.13 Pass
V1 213 Pass 0.74 Pass
V2 266 Pass 0.63 Pass
V3 208 Pass 0.57 Pass
V4 153 Pass 0.43 Pass
V5 186 Pass 0.41 Pass
V6 162 Pass 0.35 Pass
V7 216 Pass 0.37 Pass
V8 335 Pass 0.49 Pass
V9 230 Pass 0.46 Pass
V10 261 Pass 0.48 Pass
V11 202 Pass 0.47 Pass
V12 181 Pass 0.58 Pass
V13 179 Pass 0.64 Pass
V14 234 Pass 0.82 Pass
V15 478 Pass 1.98 Pass
V16 260 Pass 1.22 Pass
B1 1113 Pass 2.04 Pass
B2 496 Pass 1.56 Pass
B3 416 Pass 1.35 Pass
B4 401 Pass 1.38 Pass
B5 391 Pass 1.29 Pass
B6 243 Pass 1.31 Pass
B7 462 Pass 1.18 Pass
B8 365 Pass 1.26 Pass
B9 575 Pass 1.43 Pass
B10 420 Pass 1.38 Pass
B11 249 Pass 1.59 Pass
B12 350 Pass 1.80 Pass
B13 610 Pass 1.61 Pass
B14 553 Pass 1.62 Pass
R1 150 Pass 1.49 Pass
R2 241 Pass 1.25 Pass
R3 326 Pass 1.18 Pass
R4 237 Pass 1.28 Pass
R5 195 Pass 1.23 Pass
R6 279 Pass 1.93 Pass
R7 522 Pass 1.43 Pass
R8 221 Pass 1.84 Pass
Detector
Gain
%RCV
Value Status Value Status
FSC 636 Pass 1.39 Pass
SSC 169 Pass 1.22 Pass
SSC-B 135 Pass 2.64 Pass
UV1 1483 Pass 2.86 Pass
UV2 389 Pass 1.48 Pass
UV3 304 Pass 2.00 Pass
UV4 225 Pass 2.13 Pass
UV5 282 Pass 2.24 Pass
UV6 346 Pass 2.30 Pass
UV7 536 Pass 2.36 Pass
UV8 429 Pass 2.25 Pass
UV9 504 Pass 2.14 Pass
UV10 340 Pass 1.99 Pass
UV11 428 Pass 1.79 Pass
UV12 389 Pass 1.75 Pass
UV13 562 Pass 1.74 Pass
UV14 952 Pass 1.79 Pass
UV15 759 Pass 1.86 Pass
UV16 994 Pass 2.02 Pass
V1 148 Pass 1.43 Pass
V2 278 Pass 1.24 Pass
V3 259 Pass 1.26 Pass
V4 177 Pass 1.23 Pass
V5 202 Pass 1.24 Pass
V6 214 Pass 1.31 Pass
V7 272 Pass 1.24 Pass
V8 338 Pass 1.27 Pass
V9 303 Pass 1.20 Pass
V10 334 Pass 1.28 Pass
V11 259 Pass 1.04 Pass
V12 205 Pass 1.06 Pass
V13 196 Pass 1.11 Pass
V14 274 Pass 1.23 Pass
V15 477 Pass 1.39 Pass
V16 335 Pass 1.64 Pass
B1 607 Pass 1.88 Pass
B2 367 Pass 1.83 Pass
B3 359 Pass 1.68 Pass
B4 326 Pass 1.56 Pass
B5 246 Pass 1.59 Pass
B6 239 Pass 1.64 Pass
B7 493 Pass 1.60 Pass
B8 345 Pass 1.68 Pass
B9 466 Pass 1.83 Pass
B10 421 Pass 1.85 Pass
B11 287 Pass 2.01 Pass
B12 280 Pass 1.96 Pass
B13 423 Pass 2.22 Pass
B14 486 Pass 2.36 Pass
YG1 427 Pass 1.73 Pass
YG2 406 Pass 1.68 Pass
YG3 262 Pass 1.73 Pass
YG4 479 Pass 1.59 Pass
YG5 383 Pass 1.61 Pass
YG6 455 Pass 1.56 Pass
YG7 303 Pass 1.55 Pass
YG8 278 Pass 1.59 Pass
YG9 365 Pass 1.69 Pass
YG10 362 Pass 2.13 Pass
R1 150 Pass 1.46 Pass
R2 151 Pass 1.27 Pass
R3 215 Pass 1.28 Pass
R4 212 Pass 1.22 Pass
R5 166 Pass 1.33 Pass
R6 155 Pass 1.25 Pass
R7 268 Pass 1.37 Pass
R8 169 Pass 1.48 Pass
Detector
Gain
%RCV
Value Status Value Status
FSC 494 Pass 1.81 Pass
SSC 254 Pass 4.51 Pass
SSC-B 481 Pass 4.46 Pass
UV1 1558 Pass 3.25 Pass
UV2 738 Pass 2.32 Pass
UV3 508 Pass 2.01 Pass
UV4 537 Pass 1.94 Pass
UV5 527 Pass 2.04 Pass
UV6 684 Pass 1.93 Pass
UV7 999 Pass 2.14 Pass
UV8 869 Pass 2.07 Pass
UV9 1151 Pass 1.94 Pass
UV10 633 Pass 1.71 Pass
UV11 814 Pass 1.75 Pass
UV12 686 Pass 1.65 Pass
UV13 974 Pass 1.70 Pass
UV14 1583 Pass 1.94 Pass
UV15 1218 Pass 2.10 Pass
UV16 1769 Pass 2.64 Pass
V1 329 Pass 3.07 Pass
V2 434 Pass 3.22 Pass
V3 415 Pass 3.34 Pass
V4 273 Pass 3.31 Pass
V5 302 Pass 3.33 Pass
V6 291 Pass 3.18 Pass
V7 381 Pass 2.72 Pass
V8 505 Pass 2.00 Pass
V9 455 Pass 1.78 Pass
V10 461 Pass 1.66 Pass
V11 355 Pass 1.53 Pass
V12 334 Pass 1.50 Pass
V13 297 Pass 1.48 Pass
V14 354 Pass 1.55 Pass
V15 517 Pass 1.61 Pass
V16 434 Pass 1.67 Pass
B1 1878 Pass 2.97 Pass
B2 1109 Pass 2.56 Pass
B3 959 Pass 2.25 Pass
B4 854 Pass 1.97 Pass
B5 746 Pass 1.74 Pass
B6 582 Pass 1.71 Pass
B7 1189 Pass 1.72 Pass
B8 837 Pass 1.74 Pass
B9 1172 Pass 1.81 Pass
B10 904 Pass 1.81 Pass
B11 549 Pass 1.95 Pass
B12 589 Pass 1.90 Pass
B13 688 Pass 2.09 Pass
B14 1034 Pass 2.30 Pass
YG1 670 Pass 2.80 Pass
YG2 690 Pass 2.49 Pass
YG3 409 Pass 2.35 Pass
YG4 804 Pass 2.21 Pass
YG5 651 Pass 2.07 Pass
YG6 776 Pass 1.67 Pass
YG7 498 Pass 1.49 Pass
YG8 502 Pass 1.60 Pass
YG9 583 Pass 1.60 Pass
YG10 605 Pass 1.58 Pass
R1 288 Pass 2.13 Pass
R2 284 Pass 1.81 Pass
R3 510 Pass 1.88 Pass
R4 431 Pass 1.78 Pass
R5 263 Pass 1.75 Pass
R6 293 Pass 1.76 Pass
R7 581 Pass 1.98 Pass
R8 302 Pass 1.85 Pass
#| '!! shinylive warning !!': |
#|   shinylive does not work in self-contained HTML documents.
#|   Please set `embed-resources: false` in your metadata.
#| standalone: true
#| viewerHeight: 450

webr::install("dplyr")
webr::install("gt")

library(shiny)
library(dplyr)
library(gt)

ui <- fluidPage(
  fluidRow(
    column(6,
           fluidRow(
             column(12, align = "center",
                    dateInput("date", label = "Select Date:", value = Sys.Date())
             )
           ),
           fluidRow(
             column(12, align = "center",
                    actionButton("btn_3L", label = "3L"),
                    actionButton("btn_4L", label = "4L"),
                    actionButton("btn_5L", label = "5L"),
                    actionButton("btn_CS", label = "CS")
             )
           ),
           fluidRow(
             column(12, align = "center",
                    actionButton("render", label = "Render Output")
             )
           ),
           # Output Section
           fluidRow(
             column(12,
                    tableOutput("qc_table")
             )
           )
    )
  )
)

server <- function(input, output, session) {
  
  data_path <-                                                
    paste(                                                  
      "https://raw.githubusercontent.com",                  
      "UMGCCFCSS", "InstrumentQC",                   
      "main", "data", "HistoricalData.csv",                              
      sep = "/"                                             
    ) 
  
  Data <- read.csv(data_path, check.names = FALSE)
  Data$Date <- as.Date(Data$Date) 
  
  function_path <-                                               
    paste(                                                  
      "https://raw.githubusercontent.com",                  
      "DavidRach", "Luciernaga",                   
      "master", "R", "DashboardHelpers.R",                              
      sep = "/"                                             
    )
  source(function_path)
  
  selected_instrument <- reactiveVal()
  
  observeEvent(input$btn_3L, { selected_instrument("3L") })
  observeEvent(input$btn_4L, { selected_instrument("4L") })
  observeEvent(input$btn_5L, { selected_instrument("5L") })
  observeEvent(input$btn_CS, { selected_instrument("CS") })

  table_data <- eventReactive(input$render, {
    req(input$date, selected_instrument())
    
    InstrumentSubset <- Data %>% filter(Instrument == selected_instrument())
    DateSubset <- InstrumentSubset %>% filter(Date == input$date)
    
    if (nrow(DateSubset) > 0) {
      TableData <- DateSubset %>% select(-Instrument, -Date)
      SmallTable(data = TableData)
    } else {
      NULL
    }
  })

  output$qc_table <- render_gt({
    req(table_data())
    table_data()
  })
}

app <- shinyApp(ui = ui, server = server)
Instruments
Date 3L 4L 5L CS
2026-09-16 NA NA NA Pass
2026-09-15 NA NA NA Pass
2026-09-14 NA NA NA Pass
2026-09-11 NA NA NA Pass
2026-09-10 NA NA NA Pass
2026-09-09 NA NA NA Pass
2026-09-08 NA NA NA Pass
2026-09-04 NA Pass Pass NA
2026-09-03 NA Pass Pass Pass
2026-09-02 NA Pass Pass NA
2026-09-01 Pass Pass Pass Pass
2026-08-31 Pass Pass Pass NA
2026-08-28 Pass Pass Pass Pass
2026-08-27 Pass Pass Fail Pass
2026-08-26 Pass Pass Pass Pass
2026-08-25 Pass Pass Pass Pass
2026-08-24 Pass Pass Pass Caution
2026-08-21 Pass Pass Pass NA
2026-08-19 Pass Pass Pass NA
2026-08-18 Pass Pass Pass NA
2026-08-17 Pass Pass Pass Pass
2026-08-14 Pass Pass Pass Pass
2026-08-13 Pass Pass Pass NA
2026-08-12 Pass Pass Pass Pass
2026-08-11 Pass Pass Pass Caution
2026-08-10 Pass Pass Pass NA
2026-08-07 Pass Pass Pass NA
2026-08-06 Pass Pass Caution NA
2026-08-05 Pass Pass NA Pass
2026-08-04 Pass NA NA NA
2026-08-03 Pass NA NA NA
2026-07-31 Pass NA NA NA
2026-07-30 Pass NA NA NA
2026-07-29 Pass NA NA NA
2026-07-28 Pass NA NA NA
2026-07-27 Pass NA NA NA
2026-07-24 Pass NA NA NA
2026-07-23 Pass NA NA NA
2026-07-22 Pass NA Pass NA
2026-07-21 Pass NA Pass Pass
2026-07-20 Pass Fail Pass Pass
2026-07-18 NA NA Pass NA
2026-07-17 Pass Fail Pass Pass
2026-07-16 Pass Fail Pass Pass
2026-07-15 Pass Fail Pass Pass
2026-07-14 Pass Pass Pass Pass
2026-07-13 Pass Fail Pass Pass
2026-07-10 Pass Pass Pass Pass
2026-07-09 Pass NA NA Pass
2026-07-08 Pass NA NA Pass
2026-07-07 Pass NA NA NA
2026-07-06 Pass NA NA NA
2026-07-02 Pass NA NA NA
2026-07-01 Pass NA NA NA
2026-06-30 Pass NA NA NA
2026-06-29 Pass NA NA NA
2026-06-26 Pass NA NA NA
2026-06-25 Pass NA NA NA
2026-06-24 Pass NA NA NA
2026-06-23 Pass NA NA NA
2026-06-22 Pass NA NA NA
2026-06-18 Pass NA NA NA
2026-06-17 Pass NA NA NA
2026-06-16 Pass NA NA NA
2026-06-15 Pass NA NA NA
2026-06-12 Pass NA NA NA
2026-06-11 Pass NA NA NA
2026-06-10 Pass NA NA NA
2026-06-09 Pass NA NA NA
2026-06-08 Pass NA NA NA
2026-06-05 Pass NA NA NA
2026-06-04 Pass NA NA NA
2026-06-03 Pass NA NA NA
2026-06-02 Pass NA NA NA
2026-06-01 Pass NA NA NA
2026-05-29 Pass NA NA NA
2026-05-28 Pass NA NA NA
2026-05-27 Pass NA NA NA
2026-05-26 Pass NA NA NA
2026-05-22 Pass NA NA NA
2026-05-21 Pass NA NA NA
2026-05-20 Pass NA NA NA
2026-05-19 Pass NA NA NA
2026-05-18 Pass NA NA NA
2026-05-15 Pass NA NA NA
2026-05-14 Pass NA NA NA
2026-05-13 Pass NA NA NA
2026-05-12 Pass NA NA NA
2026-05-11 Pass NA NA NA
2026-05-08 Pass NA NA NA
2026-05-07 Pass NA NA NA
2026-05-06 Pass NA NA NA
2026-05-05 Pass NA NA NA
2026-05-04 Pass NA NA NA
2026-05-01 Pass NA NA NA
2026-04-30 Pass NA NA NA
2026-04-29 Pass NA NA NA
2026-04-28 Pass NA NA NA
2026-04-27 Pass NA NA NA
2026-04-24 Pass NA NA NA
2026-04-23 Pass NA NA NA
2026-04-22 Pass NA NA NA
2026-04-21 Pass NA NA NA
2026-04-20 Pass NA NA NA
2026-04-17 Pass NA NA NA
2026-04-16 Pass NA NA NA
2026-04-15 Pass NA NA NA
2026-04-14 Pass NA NA NA
2026-04-13 Pass NA NA NA
2026-04-10 Pass NA NA NA
2026-04-09 Pass NA NA NA
2026-04-08 Pass NA NA NA
2026-04-07 Pass NA NA NA
2026-04-06 Pass NA NA NA
2026-04-03 Pass NA NA NA
2026-04-02 Pass NA NA NA
2026-04-01 Pass NA NA NA
2026-03-31 Pass NA NA NA
2026-03-30 Pass NA NA NA
2026-03-27 Pass NA NA NA
2026-03-26 Pass NA NA NA
2026-03-25 Pass NA NA NA
2026-03-24 Pass NA NA NA
2026-03-23 Pass NA NA NA
2026-03-20 Pass NA Pass Pass
2026-03-19 Pass NA NA Pass
2026-03-18 Pass Pass Pass Pass
2026-03-17 Pass Pass Pass Pass
2026-03-16 Pass Pass Pass Pass
2026-03-13 Pass Pass Pass Pass
2026-03-12 Pass Pass Pass Pass
2026-03-11 Pass Pass Pass Pass
2026-03-10 Pass Pass Pass Pass
2026-03-09 Pass Pass Pass Pass
2026-03-06 Pass Pass Pass Pass
2026-03-05 Pass Pass Pass Pass
2026-03-04 Pass Pass Pass Pass
2026-03-03 Pass Pass Pass Pass
2026-03-02 Pass Pass Pass Pass
2026-02-27 Pass Pass Pass Pass
2026-02-26 Pass Pass Pass Pass
2026-02-25 Pass Pass Pass Pass
2026-02-24 Fail Pass Pass Pass
2026-02-20 Pass Caution Pass Pass
2026-02-19 Pass Caution Pass Pass
2026-02-18 Pass Pass Pass Pass
2026-02-17 Pass Pass Pass NA
2026-02-16 Pass Pass Pass Pass
2026-02-13 Pass Pass Pass Caution
2026-02-12 Pass Pass Pass Fail
2026-02-11 Pass Pass Pass Pass
2026-02-10 Pass Pass Pass Pass
2026-02-09 Pass Pass Pass Caution
2026-02-06 Pass Pass Pass Pass
2026-02-05 Pass Pass Pass Pass
2026-02-04 Pass Fail Pass Pass
2026-02-03 Pass Caution Pass Pass
2026-02-02 Pass Pass Pass Pass
2026-01-31 Pass NA NA NA
2026-01-30 Pass Caution Pass NA
2026-01-29 Pass Fail Pass Pass
2026-01-28 Pass Fail Pass Pass
2026-01-27 Pass NA Pass NA
2026-01-23 Pass Fail Pass Pass
2026-01-22 Pass Fail Pass Pass
2026-01-21 Pass Fail Pass Pass
2026-01-20 Pass Caution Pass Pass
2026-01-19 NA NA Fail NA
2026-01-16 Pass Caution Pass Pass
2026-01-15 Pass Caution Pass Caution
2026-01-14 Pass Caution Pass NA
2026-01-13 Pass Caution Pass NA
2026-01-12 Pass Pass Pass Pass
2026-01-09 Pass Caution Pass Pass
2026-01-08 Pass Caution Pass Caution
2026-01-07 Pass Caution Pass NA
2026-01-06 Pass NA NA NA
2026-01-05 Pass Caution Pass Pass
2026-01-02 NA NA NA Pass
2026-01-01 Pass Pass Pass NA
2025-12-28 NA NA Fail NA
2025-12-27 NA NA Pass NA
2025-12-26 NA NA Pass NA
2025-12-25 NA NA Pass NA
2025-12-24 NA NA Pass NA
2025-12-23 Pass Caution Pass Pass
2025-12-22 NA NA NA Pass
2025-12-19 Pass Pass Pass NA
2025-12-18 Pass Caution Pass Pass
2025-12-17 Pass Caution Pass Caution
2025-12-16 Pass Pass Pass NA
2025-12-15 Pass Caution Pass Pass
2025-12-12 Pass Caution Pass Pass
2025-12-11 Pass Caution Pass Pass
2025-12-10 Pass Caution Pass Pass
2025-12-09 Pass Caution Pass NA
2025-12-08 Pass Pass Pass Pass
2025-12-05 Pass Caution Pass Fail
2025-12-04 Pass Caution Fail Fail
2025-12-03 Pass Pass Caution NA
2025-12-02 Pass Caution Pass NA
2025-12-01 Pass Pass Pass Pass
2025-11-28 NA Caution NA NA
2025-11-26 Pass Caution Pass Caution
2025-11-25 Pass Pass Pass Caution
2025-11-24 Pass NA Pass Caution
2025-11-23 NA NA Pass NA
2025-11-21 Pass Pass Pass NA
2025-11-20 Pass Pass Pass Fail
2025-11-19 Pass Pass Pass Caution
2025-11-18 NA NA Pass NA

Dashboard data last updated on 2026-09-16

Definitions:

Pass: All gains within 100% baseline and all RCVs <6% for all detectors.

Caution: All gains within 100% baseline, but at least one detector had a RCV above the >6% cutoff. Instrument remains usable but resolution for fluorophores on the failed detector may decrease.

Fail: Either a gain exceeded 100% baseline, or RCVs exceeded >6% for at least one indicator detector. Significant variation and batch effects may occcur.

For additional information, navigate to the Help page.

About

This dashboard contains the visualized QC data for the Cytek and BD cytometers at the UMGCC FCSS

For additional flow cytometry resources, visit our website

This dashboard was created with Quarto and is maintained by David Rach

University of Maryland, Baltimore

 

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